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Secondly, a list of features of interest will be established and a corresponding family of software will be automatically produced using the software tool produced in the first step.
(2015) The reconstructed tree in the lineage based model of protracted speciation Journal of Mathematical Biology 70: 367 397 Warren, B.
The moments of these features will be systematically computed on selected RFam families (Griffiths Jones et al.
, 2003), and the candidate will test their capacity to discriminate RNA sequences belonging to different functional families.
To that purpose, a list of natural hypotheses will be tested, coupled with exploratory approaches using machine learning approaches based on the Weka toolbox (Bouckaert et al.
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